Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLPQNFMWGGALAANQFEGGYEKGGKGLSVIDVMTSGAHGKARQITESIDLNHYYPNHEGIDFYHRYKEDIALFKEMGLKCLRTSIAWTRIFPNGDEDVPNEEGLAFYDRIFDELIAQGIEPVVTLSHFEMPLHLAKHYGGFRNREVVDYFVHFARVVFERYKDKVTYWMTFNEINNQMDTSNPIFLWTNSGVALTENDNPE----EVLYQVAHHELLASALAVRLGKEINPKFKIGTMISHVPIYPYSCHPKDMMEAQIANR-LRFFFPDVQVRGYYPSYAKKMLARKGYDVGWQEGDDSILQQGTVDYIGFSYYMSTAVKHDVDTTVENNIVNGGLNHSVENPHIATSDWGWAIDPDGLRYTLNVLYDRY-QLPLFIVENGFGAVDEVV-DGHIHDDYRIEYLKAHITAAIEAVDQDGVDLIGYTPWGIIDIVSFTTGEMKKRYGLIYVDRDNDGHGTMERLKKDSFYWYQQVIASNGDKL |
| 4PTW Chain:B ((7-444)) | ---FPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENGDTGDIACDHY----------HLYREDIELMKEIGIRSYRFSTSWPRILPEGKGRV-NQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQAL-QDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEP----------WVVAFEGHAFG-NHAPGTKDFKTALQVAHHLLLSHGMAVDIFREEDLPGEIGITLNLTPAYPAGDSEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISR-DIDFLGINYYSRMVVRHKPG----DNLFNAEVVKMEDRP---STEMGWEIYPQGLYDILVRVNKEYTDKPLYITENGAAFDDKLTEEGKIHDEKRINYLGDHFKQAYKAL-KDGVPLRGYYVWSLMDNFEWAYG-YSKRFGLIYVDYENGNR----RFLKDSALWYREVI------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233520 for 3803 contacts (-61.4/contact) +
2D Compatibility (PS) -46001 + (NN) -17091 + (LL) 1600
1D Compatibility (HY) -31200 + (ID) 7750
Total energy: -333962.0 ( -87.82 by residue)
QMean score : 0.543
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