Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATQDPRTKFKTTEYEKQEQEVPGLQSEMTPAPDCGETSYQGHQRLQGYKMLVTGGDSAIGRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAVLIPGDIRDEQFNYDLVEQAYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNVYPLFWTVQKALEYLKP--GASITTTSSVQGYNPS-PILHDYAASKAAIISLTKSFSEELGPKGIRVNCVAPGPFWSPLQIS---GGQPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEESSYTTGQVFGVSGGVQID |
| 3TOX Chain:A ((4-255)) | -------------------------------------------SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVT--ARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA-LKRIARPEEIAEAALYLASDGASFVTGAALLADGGASV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87264 for 2185 contacts (-39.9/contact) +
2D Compatibility (PS) -26655 + (NN) -11264 + (LL) 2084
1D Compatibility (HY) -8000 + (ID) 4200
Total energy: -135299.0 ( -61.92 by residue)
QMean score : 0.485
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