Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNMNQTIMDAFHFRHATKQFDPQKKVSKEDFETILESGRLSPSSLGLEPWKFVVIQDQALRDELKAHSWGAAK-----------------------QLDTASHFVLIFARKNVTSRSPYVQHMLRDIKKYEAQTIPAVEQKFDAFQADFHISDNDQAL-YDWSSKQTYIALGNMMTTAALLGIDSCPMEGF--SLDTVTDILANKGILDTEQFGLSVMVAFGYRQQDPPKNKTRQAYEDVIEWVGPKE |
| 3GFA Chain:A ((2-197)) | ------MISDSISKRRSIRKYKN-QSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEKESMLKAMSKGIQNEINDNGLLPGSRQHIAGANYTVEIMKQAPVTIFILNILG---------------KSPLE--------K---------LSP-EERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAYRELCEWLNT----D---SQLVAAISLGYPDEEP-SRRPRLQLSDVTEW----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71730 for 1228 contacts (-58.4/contact) +
2D Compatibility (PS) -18450 + (NN) -6054 + (LL) 3544
1D Compatibility (HY) -7600 + (ID) 2300
Total energy: -102590.0 ( -83.54 by residue)
QMean score : 0.492
|
|
|