Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIFLIVIALVLSACNSNSSHAKELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHINKDDIVAYSPILEKYVGKDITLKELIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKKNKNFLLDLMFNNKNGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVI-FTNKDNKSDKPNDKLISETAKSVMKEF |
| 2ZQC Chain:A ((6-262)) | ------------------------QQLEALEKSSGGRLGVALINTADNSQILYRADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAEKHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTAPTLNTAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWVVGDKTGSG-DYGTTNDIAVIWPENHA-PLVLVTYFTQPEQKAENRND-ILAAAAKIVTHGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42916 for 2300 contacts (-18.7/contact) +
2D Compatibility (PS) -27625 + (NN) -13248 + (LL) 2800
1D Compatibility (HY) -14000 + (ID) 4750
Total energy: -99739.0 ( -43.36 by residue)
QMean score : 0.781
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