Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFF-----------GYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQ---------KELVDMGQGIFLVHCSQCHGITADGLHG----SAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMP--AIEMDEKDAKAIASYVMA-ELSSVKKTKNPQLIDKGKELFESMGCAGCHGNDGKGLQE----NQVFAADLTTYGTESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 3MK7 Chain:C ((1-303)) | MS------TFWSGYIALLTLGTIVALFWLIFATRKGESAGTTDQTMGHAFDGIEEYDNPLPRWWFLLFIGTLVFGILYLVLYPGLGNWKGVLPGYEGGWTQEKQWEREVAQADEKYGPIFAKYAAMSVEEVAQDPQAVKMGARLFANYCSICHGSDAKGSLGFPNLADQDWRWGGDAASIKTSILNGRIA------AMPAWGQAIGEEGVKNVAAFVRKDLAGLPLPEGTDADLSAGKNVYAQT-CAVCHGQGGEGMAALGAPKLNSAAGWIYGSSLGQLQQTIRHGRNG---QMPAQQ-QYLGDDKVHLLAAYVYSLSQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59716 for 1652 contacts (-36.1/contact) +
2D Compatibility (PS) -28441 + (NN) -11021 + (LL) 532
1D Compatibility (HY) -10400 + (ID) 3250
Total energy: -112296.0 ( -67.98 by residue)
QMean score : 0.383
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