Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNDFNLLILSGPSGAGKSTLTKYLQEKIP-KTHFSLSTTTRKPREGEVDGLHYNFVSEEEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFDIDVQGHEILKKHYP--NACSVFISTKNQEILKERLLLRGTDSKETIEKRLINAYKEMQCL--ESFDYLIINEDLEKSKEIILSIAKTLVHRLKAFNFEKICKAWKNESL
2QOR Chain:A ((9-197))
-MARIPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDKDDFERKLKEGQFLEFDKYANNFYGTLKSEYDLAVGEGKICLFEMNINGVKQLKESKHIQDGIYIFVKPPSIDILLGRLKNRNTEKPEEINKRMQELTREMDEADKVGFNYFIVNDDLARTYAELREYLLGSYPQLRGG--------------
General information:
TITO was launched using:
RESULT:
Template:
2QOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50321 for 1377 contacts (-36.5/contact) +
2D Compatibility (PS) -20821 + (NN) -13004 + (LL) 1604
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -98492.0 ( -71.53 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_2QOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QOR-query.scw
PDB file :
Tito_Scwrl_2QOR.pdb
: