Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALPVYYDKDIDLGVIQS-LQVGIIGYGVQGEAQALNLRDS------KVKVRIGLYQGSLSVSKAKKEGFEV-----LGVKELVQQSDVIMALLPDELHKEVLEKEVIPFLKEGQIIGFAHGFSVHFNQ---VVLPKGVGAILVAPKGPGSALREEYLKN-----RGLYHLIAIEQESSIHNAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIVRMGFETLIKAGYPEELAYFECVHEVKLVA-DLLHYKGVEGLRKHISNTAEFGAIKAREPMGNLLE-------KRMQKILKKIQNGAFAKDFLLEKS-----LNYPRLNTERKALKETKIEQIGEILRAPFNHKK |
| 3FR7 Chain:A ((48-384)) | ------------PEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEK-IFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDG-RATDVALGWSVALGSP--FTFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEGKK---E----FNKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFP--MGNIDQTRMWKVGEKVRSTRPEND |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136387 for 2275 contacts (-60.0/contact) +
2D Compatibility (PS) -33396 + (NN) -15482 + (LL) 1800
1D Compatibility (HY) -19200 + (ID) 4300
Total energy: -206965.0 ( -90.97 by residue)
QMean score : 0.512
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