Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQTTINHSVELVGIGLHKGVPVKLVLEPLEENQGIVFYRSDLGVKLPLKPENIVDTKMATVLGKDNARISTIEHLLSAVHAYGIDNLKISVDNEEIPIMDGSALTYCMLLDEAGIKELDAPKKVMEIKQAVEVREGDKFVKIEPDSQLSLNFTIDFNHPVIAKQAHHFVFSKTAYKEQVAKARTFGFLQEVNYLRSIGLAKGGSLNNCIVLDENSILNKEGLRCEKEFVCHKILDAMGDLMVLGMPVMGKYTSFSGSHKLNSMLVKAILADAKNYEVLIASDPAKEFALQKAFA |
1P42 Chain:A ((1-267)) | GLEKTVKEKLSFEGVGIHTGEYSKLIIHPEKEGTGIRFFKN--GVYIPARHEFVVHTNHSTDLGFKGQRIKTVEHILSVLHLLEITNVTIEVIGNEIPILDGSGWEFYEAIRKNILNQNRE-IDYFVVEEPIIVEDEGRLIKAEPSDTLEVTYEGEFKNFL----GRQKFTFVEGNEEEIVLARTFAFDWEIEHIKKVGLGKGGSLKNTLVLGKDKVYNPEGLRYENEPVRHKVFDLIGDLYLLGSPVKGKFYSFRGGHSLNVKLVKELAKKQK--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147178 for 2317 contacts (-63.5/contact) +
2D Compatibility (PS) -28505 + (NN) -5715 + (LL) 2448
1D Compatibility (HY) -20400 + (ID) 4650
Total energy: -204000.0 ( -88.04 by residue)
QMean score : 0.419
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