Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRAKMKDIYLDVEKSIKDLQSIFKNADGRDEKLKRFNQEALEVFQKLERESLKEL-------ESLKN--NEEWENFTIAFYGETGAGKSTLIECLRMFFKEQSKV--DQQ----ERFKRLYSTYQYNHQNFILLDVPGIEG---S-EKKVIDQISNATQKAHAIFMLPKRLILRKKEKKGKGERLKKSKNSLIRKQRYGRFSTNRLIAQEP |
2GHI Chain:A ((15-182)) | -------------------------------------------GVNIEFSDVNFSYPKQTNHRTLKSINFFIPSGTTCALVGHTGSGKSTIAKLLYRFYDAEGDIKIGGKNVNKYNRNSIRSIIGIVPQDTILFNETIKYNILYGKLDATDEEVIKATKSAQLYDFIEALPKKWDTIVGNKGMKLSGGERQRIAIARCLLKDPKIVIFDEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GHI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28960 for 989 contacts (29.3/contact) +
2D Compatibility (PS) -14834 + (NN) 5337 + (LL) 3540
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: 18403.0 ( 18.61 by residue)
QMean score : 0.166
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