Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHNGHDKLNGVLRGFLGDSFTLDGKEGGLNMSKMLEFIKKEKPKMN--------VLLMGATGVGKSSLINALFGK------EITKT-------GVGKPITQHLEKYIDEEKGLILWDTKGIEDKDYHDTMQSIKKEMEDSFKTLDEKEAIDVAYLCVKETSSRVQERERELLSFAKHWNIPTIVVFTHTQAEAGDAFVQETKGIIDEEWGFKGFVRAYVRVNSVAFSFRGLKVPVEGLEELVDETKKCLSDAEKNKKRHFLSIQRVKIQERKQAMIEECKTIIHVASGAAGVAGLIPIPFSDALAIAPI------QAGMIYKMNDAFGMDL--DKSVGASLVAGLLGVTAVAQVGRTLVNGFLKFIPVVGSVAGGATA---AVITEGIGFAYLKVLEKCFNDETGEVNLPGEV--GMITSLFKENYLNLDTIKKLKP |
| 2CE7 Chain:A ((5-457)) | YKPSGNKRVT--------FKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFID-EIDAVGRHDEREQTLNQLLVEMDGFDSKE--GIIVMAATNRPDILD------PALLRPGRFDKKIVVDPPDMLGRKKILEIHTR--------NKPLAEDVNLEIIAKRTPGF--VGADLENLVNEAALLAAREGRDK----ITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQL-GMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93557 for 2893 contacts (-32.3/contact) +
2D Compatibility (PS) -39014 + (NN) -9085 + (LL) 2788
1D Compatibility (HY) -12400 + (ID) 2700
Total energy: -153968.0 ( -53.22 by residue)
QMean score : 0.301
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