Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISKFLLKSMFKQWKNGDYQVVFWDNSVYRNGEHSPKFTLKIHRPLKFSDIKKDMSLTIAEAYMDGVIDIEGSMDEVMHSLYLQTNYEHLHKHDSAKAVQKPLKESSNISKHYDLGNDFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKQGEKLLDIGCGWGYLSIKAAQEYGAEVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYRFDKVVSVGMFEHVGKDNLPFYFKKVKEVLKRGGMFLLHSILCCFEGK--------------TNAWVDKYIFPGGYLPSLREVMSVMSECDFHLLMAESLRIHYAKTLDIWRDNFNHNLDQVKRLGYDERFIRMWDLYLRTCASAFRVGSADLFQLLLTNSVDNTFPLTKEYIYQ |
2FK8 Chain:A ((38-316)) | ------------------------------------------------------------------------------------------------------------IQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAE---PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSLRPHYIKTLRIWGDTLQSNKDKAIEV-TSEEVYNRYMKYLRGCEHYFTDEMLDCSLVTYLKPGAAA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169791 for 2234 contacts (-76.0/contact) +
2D Compatibility (PS) -28306 + (NN) -5235 + (LL) 8200
1D Compatibility (HY) -16400 + (ID) 4200
Total energy: -215732.0 ( -96.57 by residue)
QMean score : 0.455
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