Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQSHQNLQSQFFIEHILQILPHRYPMLLVDRIIELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQTGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE
2GLP Chain:D ((20-171))
-------LQSQFFIEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE
General information:
TITO was launched using:
RESULT:
Template:
2GLP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115103 for 1157 contacts (-99.5/contact) +
2D Compatibility (PS) -15858 + (NN) -2406 + (LL) 488
1D Compatibility (HY) -24400 + (ID) 7500
Total energy: -164779.0 ( -142.42 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_2GLP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GLP-query.scw
PDB file :
Tito_Scwrl_2GLP.pdb
: