Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSG-SAELSAGKREIAKEIGELFAQGKG--TMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE |
3S06 Chain:A ((14-149)) | --------------------------------------------------------------------------------------------------------------------------------------EGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVH--INVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLI--QYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3S06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -17094 for 931 contacts (-18.4/contact) +
2D Compatibility (PS) -14510 + (NN) -9291 + (LL) 11224
1D Compatibility (HY) -7200 + (ID) 1850
Total energy: -38721.0 ( -41.59 by residue)
QMean score : 0.411
|
|
|