Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKPDIVTLDITMPEMDGLEALAQIMAKD--PSAKVIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRVLEALEKAAK
3OLX Chain:A ((6-122))
-LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTSEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNK---
General information:
TITO was launched using:
RESULT:
Template:
3OLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67486 for 916 contacts (-73.7/contact) +
2D Compatibility (PS) -12680 + (NN) -9930 + (LL) 560
1D Compatibility (HY) -10000 + (ID) 2150
Total energy: -101686.0 ( -111.01 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_3OLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OLX-query.scw
PDB file :
Tito_Scwrl_3OLX.pdb
: