Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHI-PTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAP--EYIFSVFCSPVGPY-----FKGGMAPTNFIVSDFDRAAPN-GTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANFFGITKDDKFVTPYS-PSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKLDEFKEAGACGTAAVITPIGGIQTKDDFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGWIYKVK |
| 1IYE Chain:A ((8-308)) | ---------------------------YIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHK-GPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNN--------LTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQG---IDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVNG--YISEGAGENLFE-VKDGVLFTPPFTSSALPGITRDAIIKLAKE-LGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVD--GI--QVG-EGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141147 for 2413 contacts (-58.5/contact) +
2D Compatibility (PS) -31608 + (NN) -11742 + (LL) 2280
1D Compatibility (HY) -13600 + (ID) 4650
Total energy: -200467.0 ( -83.08 by residue)
QMean score : 0.417
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