Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAVEKITMPKLGESVTEGTISSWLVKPGDTVEKYDAIAEVLTDKVTAEIPSSFSGTIKEILAEEDETLEVGEVICTIETEEASSSEPVVEAEQTEPKTPEKQETKQVKLAEAPASGRFSPAVLRIAGENNIDLSTVEGTGKGGRITRKDLLQVIENGPVAPKREEVKSAPQEKEATPNPVRSAAGDREIPI--NGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNTVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTW--AGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADM-EGGTFTVNSTGSFGSVQSMGIINHPQ---AAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKAKVEKISKENTALY |
| 1B5S Chain:A ((184-425)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAKPATTEGEFPETRE-KMS-GIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAHRKKFKAIAAE-KGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMK-GASCTITNIGSAGGQWFTPVI--NHPEV-AILGIGRIAEKPIVRDGEIVAAPMLALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLM--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147388 for 1669 contacts (-88.3/contact) +
2D Compatibility (PS) -25408 + (NN) -8642 + (LL) 11848
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -187190.0 ( -112.16 by residue)
QMean score : 0.458
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