Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceLTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTWEPDITVRHILVDDE--------ATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN
3GPK Chain:A ((6-105))---------------------------------------------------------------------------------------------------------------------------------------EEYRIGEIFLAATEENKPQVFANAEKIVEQLKQGGSFVAYARQYSEAS-TAAVGGDLGWIRLAQLPTELATTAASMG-PGQLAGPVEIRGGFSILYLIDKRE-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -28198 for 680 contacts (-41.5/contact) +
2D Compatibility (PS) -10168 + (NN) -7982 + (LL) 14788
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -39860.0 ( -58.62 by residue)
QMean score : 0.687

(partial model without unconserved sides chains):
PDB file : Tito_3GPK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GPK-query.scw
PDB file : Tito_Scwrl_3GPK.pdb: