Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVENTIVIKLGGVAS--DNLTEGFFRQITEWQAAN-KKIVLVHGGGHYITKMMEALAIPVETKNGLRVTNKATLEVTKMVLIGQVQPAITTAFQKRNISVIGLNASDTGLLEADRLSDTDLGLVGKITKVKTNLIEQLLSENIITVIAPLGINSEHDWLNVNADTAACEVASALHAEALYLLTDVPGVKNGS-EIIGEIATAEIEKLQSTGVIKGGMIPKLASAAFAAENGVGQVIITD-SLNNSGTKIKNKVAIG-----
1GS5 Chain:A ((1-258))MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQ-LDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGA-DLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA


General information:
TITO was launched using:
RESULT:

Template: 1GS5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149266 for 2121 contacts (-70.4/contact) +
2D Compatibility (PS) -27298 + (NN) -8910 + (LL) 280
1D Compatibility (HY) -19600 + (ID) 4000
Total energy: -208794.0 ( -98.44 by residue)
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_1GS5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GS5-query.scw
PDB file : Tito_Scwrl_1GS5.pdb: