Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDKKFLLTNSTIGIIGGGQLGRMLALAAKAMGYRIIVLDPTADCPAAQVSDEQIIADYDDKVALRELSEKADVVTYEFENIDYDALKMTQN-LVSVPQGSELLSITQDRILEKAYLESANINIAPYAVIVEQDEIENEIKSIGYPAVLKTAQGGYDGKGQVVIHDARDIETAARLLRYGSCVLEAWIPFEKEISVVVARNLDGQIETFPVAENVHVNNILHTTMVPAD-VAADVYEEAEEIARKLAEVLQLCGVLAVEMFVTKSGAIYVNELAPRPHNSGHFTIEACSISQFTQHIRAIVGLPLVKPELLKPAVMINILGQHVDAVNKQMVNYPHWFVHYYGKKEAKINRKMGHVTVLADEPKAVIQDLEETQIWK |
| 3AW8 Chain:A ((1-360)) | ----------MIGILGGGQLGRMLALAGYPLGLSFRFLDPSPEACAGQVGE-LVVGEFLDEGALLRFAEGLALVTYEFENVPVEAARRLEGRLPL-YPPAKALEVAQDRLREKTFFQGLGVPTPPFHPVDGPEDLEEGLKRVGLPALLKTRR------GQALVRTEEEALEALKALGGRGLILEGFVPFDREVSLLAVRGRTGEVAFYPLVENRHWGGILRLSLAPAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVG-EELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPLGSTAPRGQSAMVNLIGEKP--PFAEVLKVEGAHLHWYGKA-VRPGRKVGHITLRRDGLKALEEGLARLSRLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234296 for 3073 contacts (-76.2/contact) +
2D Compatibility (PS) -39301 + (NN) -16790 + (LL) 660
1D Compatibility (HY) -23200 + (ID) 6000
Total energy: -318927.0 ( -103.78 by residue)
QMean score : 0.474
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