Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTN---RNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI
2DXF Chain:A ((8-153))
-ERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELFEYPRAAD---
General information:
TITO was launched using:
RESULT:
Template:
2DXF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69874 for 1079 contacts (-64.8/contact) +
2D Compatibility (PS) -15331 + (NN) -3286 + (LL) 620
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -107671.0 ( -99.79 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_2DXF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXF-query.scw
PDB file :
Tito_Scwrl_2DXF.pdb
: