Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLKSAREIEAMDRAGDFLASIHIGLRDIIKPGVDMWEVEEYVRRRCKEENVLP-LQIGVDGAVMDYPYATCCGLNDEVAHAFPRH-YTLKQGDLLKVDMVLSEPLDKSIVDVSSLNFDNVAQMKKYTETYSGGLADSCWAYAVGEVSQEVKDLMSVTREAMYIGIEKAVIGNRIGDIGAAIQDYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQGEERTY |
| 2GG2 Chain:A ((1-254)) | AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGY----HGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK---------------------------DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRT-MKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143883 for 2182 contacts (-65.9/contact) +
2D Compatibility (PS) -27270 + (NN) -8152 + (LL) 1720
1D Compatibility (HY) -16800 + (ID) 4450
Total energy: -198835.0 ( -91.13 by residue)
QMean score : 0.510
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