Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTPLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLTIDVTELAGLDDLHHPSGVIKEAQELASQLYGSAESFFLVNGTTVGNLAMILSVCEPGDTILVQRNCHKSVFH---AVDLSGAEPVYLAPDVDSAMHVPTHVPLGTIKEALEAYPDAKGLVLTNPTYYGHSADLTEIITEAHHYGIPVLVDEAHGAHFILGEPFPVSALKMGADIVVQSAHKTLPAMTMGSYLHLNSSCRINRDRVAEYLNRLQSSSPSYPIMASLDIARAYVQHIIEEQKLSDILQRIETLKQTFDSLTNAEAVNPANPLIITDPLKLTIRS-KRGHSGYTLQSILERANIFTELA----------DENQVLLVLPLGGK----RRINAEIIRSIDEEIEKTPPDQTFVSAEWGVQPVTVLPYPKKVLHSFKKEYVSFEEAAGRLNAEDIIPYPPGIPMIMAGERITKESVQKLSRLISMKTHVQGNMKIKEKQLLVYIEEEKS |
2VI8 Chain:A ((72-387)) | ---------------------------------------------------------------ELARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPET---HVIDYDDVREKARL-HRPKLIVAAAAA-YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAA-GLHPNP-VPYAHFVTTTTHKTLRGPRG-GMILCQEQ-FA--KQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGT-----DNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132240 for 2658 contacts (-49.8/contact) +
2D Compatibility (PS) -32995 + (NN) -12756 + (LL) 11596
1D Compatibility (HY) -6800 + (ID) 2650
Total energy: -175845.0 ( -66.16 by residue)
QMean score : 0.498
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