Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKLIEREKTVYYKEKPDPSSLGFGQYFTDYMFVMDYEEGIGWHHPRIAPYAPLTLDPSSSVFHYGQAVFEGLKAYRTDDGRVLLFRPDQNIKRLNRSCE--RMSMPPLDEELVLEALTQLVELEKDWVPKEKGTSLYIRPFVIATEPSLGVK--ASRSYTFMIVLSPVGSYYGDDQLKPVRIYVEDEYVR-AVNGGVGFAKTAGNYAASLQAQRKANELGYDQVLWLDAIEKKYVEEVGSMNIFFVINGEAVTPALSGSI-LSGVTRASAIELIRSWGIPVREERISIDEVYAASARGELTEVFGTGTAAVVTPVGELNIHGKTVIVGDGQIGDLSKKLYETITDIQLGKVKGPFNWTVEV
2EJ3 Chain:B ((3-294))------------------------------------IKAGLIWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPA-IFRLKEHVKRFYNSAKVLRMEIPFAPEELE-EAIKEVVR-------RNGYRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSSWARFPANVMPGKAKVGGNYVNSALAKMEAVAAGADEALLLD--EEGYVAEGSGENLFFVRDG--VIYALEHSVNLEGITRDSVIRIAKDLGYEVQVVRATRDQLYMAD------EVFMTGTAAEVTPVSMIDWRP----IGKGTAGPVALRLREVYLEAVTGR-----------


General information:
TITO was launched using:
RESULT:

Template: 2EJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1528 -139615 -91.37 -488.16
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -91.37
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_2EJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2EJ3-query.scw
PDB file : Tito_Scwrl_2EJ3.pdb: