Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
2J9R Chain:A ((24-210))---INQNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPC-----------------VKAVPVSASKDIFKHITEEMDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEPRCRHCHAVP-----


General information:
TITO was launched using:
RESULT:

Template: 2J9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 866 -105907 -122.29 -622.98
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.88

3D Compatibility (PKB) : -122.29
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.395

(partial model without unconserved sides chains):
PDB file : Tito_2J9R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J9R-query.scw
PDB file : Tito_Scwrl_2J9R.pdb: