Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKRRTQEERSAATREALITGARKLWGLRGYAEVGTPEIATEAGVTRGAMYHQFADKAALFRDVVEVVEQDVMARMATLVAASGAATPADAIRAAVDAWLEVSGDPEVRQLILLDAPVVLGWAGFRDVAQR-YSLGMTEQLITEAIR--AGQLARQPVRPLAQVLIGAL-DEAAMFIATADDPKRARRETRQVLRRLIDGMLNG---
2QCO Chain:A ((6-207))
------TPSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSGGSYSNIYDGFKSKEGLFFEILDDICKKHFHLIYSKTQEIKNGTLKEILTSFGLAFIEIFNQPEAVAFGKIIYSQVYDKDRHLANWIENNQQNFSYNILMGFFKQQNNSYMKKNAEKLAVLFCTMLKEPYHHLNVLINAPLKNKKEQKEHVEFVVNVFLNGINS
General information:
TITO was launched using:
RESULT:
Template:
2QCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80720 for 1330 contacts (-60.7/contact) +
2D Compatibility (PS) -21965 + (NN) -10008 + (LL) 780
1D Compatibility (HY) -6800 + (ID) 1450
Total energy: -120163.0 ( -90.35 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_2QCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QCO-query.scw
PDB file :
Tito_Scwrl_2QCO.pdb
: