Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQ-------MTLSKWGEKVQVTKPPVS
4KFU Chain:A ((2-206))------NPDDIVVLV--------------GRKKSG----KSYLIKHYFIPVLKAHKISYIIDDHNLLRSGSEYSKFGYNATSLSDIVSKQYVVVYDRAKNDDFFEKLWQASKLHSKKY-----GTTVLIIDEAYYHFKYKQ--KVTPAIDEALHANRHA-------GLGLILSTQRVYDLMPIVYKQADLIIMFYTREPNELRWISKYISAEAAEKVKTLKQYHFLIYDVNSQTIKIHKPILE


General information:
TITO was launched using:
RESULT:

Template: 4KFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4535 for 1612 contacts (-2.8/contact) +
2D Compatibility (PS) -20992 + (NN) -5006 + (LL) 2224
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -35809.0 ( -22.21 by residue)
QMean score : 0.223

(partial model without unconserved sides chains):
PDB file : Tito_4KFU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KFU-query.scw
PDB file : Tito_Scwrl_4KFU.pdb: