Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQ-------MTLSKWGEKVQVTKPPVS |
4KFU Chain:A ((2-206)) | ------NPDDIVVLV--------------GRKKSG----KSYLIKHYFIPVLKAHKISYIIDDHNLLRSGSEYSKFGYNATSLSDIVSKQYVVVYDRAKNDDFFEKLWQASKLHSKKY-----GTTVLIIDEAYYHFKYKQ--KVTPAIDEALHANRHA-------GLGLILSTQRVYDLMPIVYKQADLIIMFYTREPNELRWISKYISAEAAEKVKTLKQYHFLIYDVNSQTIKIHKPILE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4535 for 1612 contacts (-2.8/contact) +
2D Compatibility (PS) -20992 + (NN) -5006 + (LL) 2224
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -35809.0 ( -22.21 by residue)
QMean score : 0.223
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