Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNRGFGRRELLVAMAMLVSVTGCARHASGARPASTTLPAGADLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVLHQNPLTHLDKLITYTSDDIRSISPVAQQHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRAGGGYDAEPREALLAEAATCVAGVLA
3SH8 Chain:A ((6-261))--------------------------------------------KDDFAKLEEQFDAKLGIFALDTGTNRTVAYRPDERFAFASTIKALTVGVLLQQKSIEDLNQRITYTRDDLVNYNPITEKHVDTGMTLKELADASLRYSDNAAQNLILKQIGGP----ESLKKELRKIGDEVTNPERFCPE----NPGETQDTSTARALVTSLRAFALEDKLPSEKRELLIDWMKRNTTGDALIRAGVPDGWEVADKTGAASYGTRNDIAIIWPPKGDPVVLAVLSSRDKKD--AKYDDKLIAEATKVVMKAL-


General information:
TITO was launched using:
RESULT:

Template: 3SH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139498 for 2238 contacts (-62.3/contact) +
2D Compatibility (PS) -27628 + (NN) -19322 + (LL) 2760
1D Compatibility (HY) -20000 + (ID) 5850
Total energy: -209538.0 ( -93.63 by residue)
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_3SH8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SH8-query.scw
PDB file : Tito_Scwrl_3SH8.pdb: