Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGESGAAAAPSITLNDEHTMPVLGLGV---AELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAI----AASGVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAP-----------PVGKY----VD---AWGGMIQSRGEGHARSIGVSNFTAENIENLID---LTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSYCPLALGR-----------LLDNPTVTSIASEYVKTPAQVLLRWNLQLGNAVVVRSARPERIASNFDVFDFELAAEHMDALGGLNDGTRVREDPLTYAGT |
2HDJ Chain:A ((8-304)) | ------------VKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKY-KPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVR----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2HDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140419 for 2128 contacts (-66.0/contact) +
2D Compatibility (PS) -27775 + (NN) -8020 + (LL) 1116
1D Compatibility (HY) -22800 + (ID) 5400
Total energy: -203298.0 ( -95.53 by residue)
QMean score : 0.478
|
|
|