Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPALVVGPAAWHAVHVTQSSSAITPGQTAELYPGDIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQD-LLLITVLKGAVLFVTDLARAIP---VPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ
1I13 Chain:B ((9-190))
-------------------------------------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVATALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVY-
General information:
TITO was launched using:
RESULT:
Template:
1I13.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171782 for 1407 contacts (-122.1/contact) +
2D Compatibility (PS) -19388 + (NN) -5607 + (LL) 2372
1D Compatibility (HY) -20400 + (ID) 4000
Total energy: -218805.0 ( -155.51 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_1I13.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I13-query.scw
PDB file :
Tito_Scwrl_1I13.pdb
: