Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRWSAETRLALVRRARRMNRALAQAFPHVYCELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRTELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGRKTANVILGNAFGIPGITVDTHFGRLVRRWRWTTAEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPSFGLGPTEPLLAAPLVQGPETDHLLALAGL
2ABK Chain:A ((4-209))
--------------AKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKV-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ABK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138936 for 1614 contacts (-86.1/contact) +
2D Compatibility (PS) -21558 + (NN) -7923 + (LL) 2708
1D Compatibility (HY) -13200 + (ID) 3600
Total energy: -182509.0 ( -113.08 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_2ABK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ABK-query.scw
PDB file :
Tito_Scwrl_2ABK.pdb
: