Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPYALLSLLATGTLLAQGAWAEDPEVLFKNKGCVACHAIDTKMVGPAYKDVAAKFAGQAGAEAELAQRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWVLSQK
1CCH Chain:A ((2-82))
-----------------------DGEALFKSKPCAACHSVDTKMVGPALKEVAAKNAGVEGAADTLALHIKNGSQGVWGPIPMPPNPVTEEEAKILAEWVLSLK
General information:
TITO was launched using:
RESULT:
Template:
1CCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20443 for 545 contacts (-37.5/contact) +
2D Compatibility (PS) -9123 + (NN) -10814 + (LL) 2112
1D Compatibility (HY) -6800 + (ID) 2800
Total energy: -47868.0 ( -87.83 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_1CCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CCH-query.scw
PDB file :
Tito_Scwrl_1CCH.pdb
: