Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFV--------ETRKNAPHLVGNQLNCVNCHLDQG----------RRANSAPQWAAYPVYPA-------FRAKNNKVNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVAPPEGG-YSIERGAKVYAAQCAICHGADGQGQMAL--GQTVFPPLWGAQSFNWGAGMHRIN-TAASFIKYNMPLGKPGTLSDRDAWDVA---AFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQ-GI----------- |
| 2XBG Chain:A ((38-345)) | ---------AIPALDYNPWEAIQLPTTA--TILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFT--PDGRLWMIVNGGKIAFSD--PDNSENWGELLSPLRRNSVGFLDLAYR-------TPNEVWLAGGAGALLCSQDGGQT-WQQDVDVKKVPSNFY---KILFFSPD-QGFILGQKGILLRYVTDLTAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29806 for 1961 contacts (-15.2/contact) +
2D Compatibility (PS) -27883 + (NN) -5107 + (LL) 1176
1D Compatibility (HY) -7600 + (ID) 2750
Total energy: -71970.0 ( -36.70 by residue)
QMean score : 0.085
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