Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALLA-------GGHVLVEGVPGLGKTLLVRALARCFDGGFARIQFTPDLMPSDVTGHAVYDLASEQFKLRKGPVFTHLLLADEINRAPAKTQAALLEVMQERQVTLE-G------RALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV |
| 1HQC Chain:A ((6-238)) | ----------------------------LRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDLAAILA------N-SLE----EGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPG-----LITAPLLSRFGIVEHLEYYTPEELAQGVMRDARL---------------------------LGVRITEEAALEIGRRSRG-----------TMRVAKRLFRRVRDFAQVAGEEVITRERALEALAAL---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109277 for 1790 contacts (-61.0/contact) +
2D Compatibility (PS) -22970 + (NN) -4217 + (LL) 8076
1D Compatibility (HY) -3200 + (ID) 2400
Total energy: -133988.0 ( -74.85 by residue)
QMean score : 0.299
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