Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLLDIKNLSVRFGDTTAVPVV-DGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLKGRQRRRIVG---KDMAMVFQ---DPMTALNPSYTVGYQIEEVLRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKAIPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA |
1XEF Chain:D ((1-233)) | ----DITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKS-TLTKLIQRFYIP---ENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANP----GMSVEKVI---YAAKLAGAHDFISELRE-----GYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGR--TVIIIAARLSTV-KNADRIIVMEKGKIVEQGKHKELLSEPESLYS--------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144043 for 1726 contacts (-83.5/contact) +
2D Compatibility (PS) -24096 + (NN) -8200 + (LL) 7048
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -186441.0 ( -108.02 by residue)
QMean score : 0.347
|
|
|