Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVSNCNPCAIHRKINYPNTKLDFEQVNNITEFILLG-------LTQNAEAQKLLFAVFTLIYFLTMVDNLIIVVTITTSPALDSPVYFFLSFFSFI------DGCSSSTMAPKMIFDLLTEKK---TISFSGCMTQLFVEHFFGGV--EIILLVVMAYDCYVAICKPLYYLITMNRQVCGLLVA---MAWVGGFLHALI------QMLLIVWLPFCGPNVIDHFICDLFPLLKLSCTDTHVFGLFVAANSGLMCMLIFSILITSYVLILCSQRKALSTCAFHITVVVLFFVPCILVYLRPMITFPIDKAVSVFYTVVTPMLNPLIYTLRNTEVKNA-MKQLWSQIIWGNNLCD---- |
| 4MFL Chain:A ((23-345)) | M-----DPETVRIALG-----LEERTAAWLTELDELGPPAEPVRLPRGEEARDLLRRLE-----VPELDAEEIVAA-APDPDRDPALWWLLERTHHAIVRHMGDHRAKPRGGPPLPYEGGAAARYFHVYVFLATVPAVRRFHAERGIPDEVGWETLTQLGELVAIHRRKYGQGGMNMQWWTTYHLRGILYRLGRLQFSLATGKDGTPHLGLAVPEWGGPLLPKAYDESLHRARPFFDRHFPEHGARVAWGSSWMLDPQLEEYLTEDSNIIQLAR------------------FWTLTDSAPEPGNA-DGDSSILEFVFRYNGQPLDELPQRSSLERAVIAHLKAGRHWHMRTGFVKLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MFL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285474 for 2162 contacts (-132.0/contact) +
2D Compatibility (PS) -29563 + (NN) -1396 + (LL) 3532
1D Compatibility (HY) 5200 + (ID) 2750
Total energy: -310451.0 ( -143.59 by residue)
QMean score : 0.217
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