Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIWDAYDQYGFITGLTLNRDQNIPQGLFHLVVDVILFHEDGDVLMMKRHPKKKAFPAYFEA-TAGGSALKGE------NAKQAILRELKEETGIVPQCLTFLNREWFSE----RSYFVDHFIAKYNGAKDIITLQEGETVDYIWLKPEYIDLFLSKNKLIPSQIKLLKSLI
3E57 Chain:A ((52-190))
-------------------------ETTKQVIPYVVIMD-GDRVLITKR----------YSLGI-GGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLINSSTTEVSRVHLGALFLGRGK----FFSVKEKDLFEWELIKLEELEKFSG--VMEGWSKISAAVLL
General information:
TITO was launched using:
RESULT:
Template:
3E57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73305 for 799 contacts (-91.7/contact) +
2D Compatibility (PS) -12611 + (NN) -4719 + (LL) 2124
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -92811.0 ( -116.16 by residue)
QMean score : 0.356
(partial model without unconserved sides chains):
PDB file :
Tito_3E57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E57-query.scw
PDB file :
Tito_Scwrl_3E57.pdb
: