Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLIGKEVLPFEAKAFKNGEFIDVTNEDLKGQWSVFCFYPADFSFVCPTELEDLQEQYAALKELGVEVYSVSTDTHFVHKGWHDSSEKISKITYAMIGDPSQTISRNFDVLDEETGLADRGTFIIDPDGVIQTVEINAGGIGRDASNLVNKVKAAQYVRQNPGEVCPAKWEEGGETLTPSLDLVGKI
4XS4 Chain:C ((1-186))-SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVSPAKWKEGEATLAPSLDLVGKI


General information:
TITO was launched using:
RESULT:

Template: 4XS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 856 -83596 -97.66 -449.44
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.93

3D Compatibility (PKB) : -97.66
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.653

(partial model without unconserved sides chains):
PDB file : Tito_4XS4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XS4-query.scw
PDB file : Tito_Scwrl_4XS4.pdb: