Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKSLVVLPLLVLVLLLVRVQPSLGKESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV
3EV0 Chain:B ((1-124))
--------------------------KETAAAKFERQHMDSSTSAASS-NYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
General information:
TITO was launched using:
RESULT:
Template:
3EV0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41823 for 887 contacts (-47.2/contact) +
2D Compatibility (PS) -13813 + (NN) -11209 + (LL) 3012
1D Compatibility (HY) -11600 + (ID) 5000
Total energy: -80433.0 ( -90.68 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_3EV0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EV0-query.scw
PDB file :
Tito_Scwrl_3EV0.pdb
: