Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFE--PDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
1M6D Chain:A ((1-213))-----------------------------------------------------------------------------------------------------------------APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK--MDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINA--FGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQR----SDVPFWAIKNSWGTDWGEKGYYYLHRG-SGACGVNTMASSAVV


General information:
TITO was launched using:
RESULT:

Template: 1M6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69649 for 1834 contacts (-38.0/contact) +
2D Compatibility (PS) -23114 + (NN) -13972 + (LL) 8744
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -118191.0 ( -64.44 by residue)
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_1M6D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M6D-query.scw
PDB file : Tito_Scwrl_1M6D.pdb: