Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANGYTYEDYQDTAKWLLSHTE-QRPQVAVICGSGLGGLVNKLTQAQTFDYSEIPNFPESTVPGHAGRLVFGILNGRACVMMQGRFHMYEGYPFWKVTFPVRVFRLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESQGKANHEEVLEAGKQAAQKLEQFVSLLMASIPVSGHTG |
3ODG Chain:A ((13-285)) | ----DFNELPFQAVKYIQKIKPGFKPQIAFILGSGLGDLVDQITNDTTISYADIPGFPVSSVHGHAGELVLGDLCGVPVMCMKGRGHFYEGKGMSIMTNPVRTFKLMGCEFLFCTNAAGSLRPEVLPGSVVMLKDHIN---TMPGTPLVGPNDDRFGPRFFSLANAYDKDLRADMAKIAQQLDIP--LTEGVFVSYPGPCFETPAEIRMMQIIGGDVVGMSVVPEVLSAAHCGLKVIALTAITNLAEGL--SDVVLSHEQTLKFAKVASVNFTKLIEAFLKSKA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ODG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188664 for 2377 contacts (-79.4/contact) +
2D Compatibility (PS) -29382 + (NN) -18238 + (LL) 280
1D Compatibility (HY) -20400 + (ID) 5650
Total energy: -262054.0 ( -110.25 by residue)
QMean score : 0.691
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