Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENGYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESL-EKANHEEVLAAGKQAAQKLEQFVSILMASIPLPDKAS |
| 4NSN Chain:A ((27-295)) | ------EQHYHEAASFLSSRLPGDAKTAIILGSGLGELAEKIENKTVIPYNEIPHFAQATAVGHKGNIIGGILGGTPVVAMQGRFHYYEGYSMDQVTFPIRVMKLLGIENLFVSNAAGGINTSFKVGDLMIICDHIN---NLP-NPLIGPNMDMFGVRFPDMTRAYDREFIAKAKGIAQELNIP--VKEGVYVGLTGPSYETPAEYKFWGQVGGDAIGMSTVPEVIVARHTGIRVFGMSVITNEGYHF--ADDFVNDEQDVIRAANAASEKMGAIFARLIAAV------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NSN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -198249 for 2386 contacts (-83.1/contact) +
2D Compatibility (PS) -28947 + (NN) -17493 + (LL) 588
1D Compatibility (HY) -26000 + (ID) 6150
Total energy: -276251.0 ( -115.78 by residue)
QMean score : 0.654
|
|
|