Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVFDLDLETEEGSEGEGEPELSPADACPLAELRAAGLEPVGHYEEVELTETSVNVGPERIGPHCFELLRVLGKGGYGKVFQVRKVQGTNLGKIYAMKVLRKAKIVRNAKDTAHTRAERNILESVKHPFIVELAYAFQTGGKLYLILECLSGGELFTHLER-EGIFLEDTACFYLAEITLALGHLHSQGIIYRDLKPENIMLSSQGHIKLTDFGLCKESIHEGAVTHTF-CGTIEYMAPEILVR---SGHNRAVDWWSLGALMYDMLTGSPPFTAENRKKTMDKIIRGK--LALPPY---LTPDARDLVKKFLKRNPSQRIGGGPGDAADVQRHPFFRHMNWDDLLAWRVDPPFRPCLQSEEDVSQF--DTRFTRQTPVDSPDDTALSESANQAFLGFTYVAPSVLDSIKEGFSFQPKLRSPRRLNSSPRAPVSPLKFSPFEGFRPSPSLPEPTELPLPPLLPPPPPSTTAPLPIRPPSGTKKSKRGRGRPGR |
| 4UAL Chain:A ((68-412)) | --------------------------------------------------------VKEMQLHREDFEIIKVIGRGAFGEVAVVK---MKNTERIYAMKILNKWEMLKRA-ETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV---VAVGTPDYISPEILQAMEDGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLIC-SRERRLG--QNGIEDFKKHAFFEGLNWENI--RNLEAPYIPDVSSPSDTSNFDV---------ILPP--HTGFSGLHLPFIGFTFTTESCFSDRGSLKS------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183577 for 2499 contacts (-73.5/contact) +
2D Compatibility (PS) -34099 + (NN) -20728 + (LL) 5188
1D Compatibility (HY) -31200 + (ID) 5650
Total energy: -270066.0 ( -108.07 by residue)
QMean score : 0.493
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