Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSDLAKRMLLIKPSPTIAVTDKANRLKDEGKKICILAAGEPDFD--TPDHIKKVAIQAIDEGK---TKYTAVDGTRELKEAIISKLKRDNNLEYA---LSQVCVGAGAKQVLFNLFMATVNPGDEAIIPAPYWVSYVDMVSLFGGLPVVIEC----GQGLKLTPELLKNKVTKKTKWLILNSPNNPAGVVYTYGELEGIAQVLLEYPHVNIITDDIYEHIIY--DEKFFTIAQVEPKLYN----RVFVVNGVSKAYAMTGWRIGYIAG-RSDVVKAISTLQSQSTSNPNSIAQAAAVEAL---NGDHSFLKERMGIFKSRRDFVIEKLNSAPGLLASIPQGAFYLFVSCKDLLGKSTKSGKVINNDLDFAEYLLEDHLVAVIPGIAFGLKNFIRISYATSQEQLEIGCNSIIKACKMLS |
| 1BJW Chain:A ((1-382)) | MRGLSRRVQAMK---PSATVAVNAKALELRRQGVDLVALTAGEPD--FDTPEHVKEAARRALA---QGKTKYAPPAGIPELREALAEKFRRENGL---SVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRF-AGGV-VVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEH-DFYLVSDEIYEHLLYEG--EHFSPGR-------VAPEHTLTVNGAAKAFAMTGWRIGYACGP-KEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVLMDT-----S-----PIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263725 for 3087 contacts (-85.4/contact) +
2D Compatibility (PS) -39586 + (NN) -20340 + (LL) 1816
1D Compatibility (HY) -22800 + (ID) 7550
Total energy: -352185.0 ( -114.09 by residue)
QMean score : 0.562
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