Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHASTGKGSKIKYSRVLFKISGEALMGSRPFGHDMELIDQLCKDISDIYKLGVQVCIVVGGGNIFRGASASLSGCERASSDYIGMLATIINALILQNFLEKNSVNSKVLSAIPMVTICEPYIRRKAIHHLEKGRVVIFAAGTGNPFFTTDTAAALRAVETNCDAILKGTQVNGVYSADPKKNEDAVMYDRLSYMDLLTRDLKVVDASAISLARENSIPIIVFSLKEE-KIVNIVKGHGTYTIVSDCE
2BNE Chain:A ((5-241))
--------AKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEANVVLKATKVDGVFTADPP---TATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLITE--
General information:
TITO was launched using:
RESULT:
Template:
2BNE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -231656 for 2018 contacts (-114.8/contact) +
2D Compatibility (PS) -26068 + (NN) -15458 + (LL) 388
1D Compatibility (HY) -22800 + (ID) 5050
Total energy: -300644.0 ( -148.98 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_2BNE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BNE-query.scw
PDB file :
Tito_Scwrl_2BNE.pdb
: