Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGK-------PLVCVGILKGSAMFMSDLIKRI---DTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
1P18 Chain:B ((9-191))
-----EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLRGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVYA-
General information:
TITO was launched using:
RESULT:
Template:
1P18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127788 for 1366 contacts (-93.5/contact) +
2D Compatibility (PS) -18645 + (NN) -3207 + (LL) 192
1D Compatibility (HY) -20800 + (ID) 3700
Total energy: -173948.0 ( -127.34 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1P18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P18-query.scw
PDB file :
Tito_Scwrl_1P18.pdb
: