Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPKKASANIFETDEETMKHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHLIPRYENDIDGF-GYKWETHEDILDNDAKQQIAEQIQAQF
3IMI Chain:A ((9-146))
-DNCIFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFNPVGFNLLNNNGEKAGQTVFHFHLHLIPRYGE--NDGFGAVWKSHQNEYTMENLQNIASTIANSV
General information:
TITO was launched using:
RESULT:
Template:
3IMI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59309 for 854 contacts (-69.4/contact) +
2D Compatibility (PS) -14592 + (NN) -6105 + (LL) 336
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -95520.0 ( -111.85 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_3IMI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IMI-query.scw
PDB file :
Tito_Scwrl_3IMI.pdb
: