Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKNKSYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDWIYSTDEEPHM--GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETWDFAHCLPYFKKLEKTYGAAP----YDKFRGHDGPIKLKRGPA---TNPLFQSFFDAGVEAGYHKTPDVNGFRQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEG--RRATGVTYKK-NGKLHTID-ANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKCKEPVSLQPSL-DIKRMPFIGL-QWIFTRTGAAASNHFEGGGFVRSNN----------------------EVDYPNLMFHFLPIAVRYD---GQKAAVAHGYQVHVGPMYSNS-RGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQ-KAMDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSAKMGPASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTNGNIHAPVLMLAEKAADIIRGRKPLEPQYIDYYKHGVHDENEGAIEVKPYAK |
| 3Q9T Chain:A ((2-575)) | --TDGSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAM-DLRNSKYDWAYKTTMVRRDDYERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEF-GGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDTIYRGQRSGS---FLF-VKNKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGSGLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLGQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEYPWEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNI-DQGVVDPKL-KVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHKD--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119379 for 5029 contacts (-23.7/contact) +
2D Compatibility (PS) -56861 + (NN) -26278 + (LL) 2032
1D Compatibility (HY) -22000 + (ID) 7300
Total energy: -229786.0 ( -45.69 by residue)
QMean score : 0.437
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