Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQNLPTIALLATGGTIAGSGVDAS-LGSYKSGELGVKELLKAIPSLNKIARIQGEQVSNIGSQDMNEEIWFKLAQRAQELLDDSRIQGVVITHGTDTLEESAYFLNLVLHSTKPVVLVGAMRNASSLSADGALNLYYAVSVAVNEKSANKGVLVVMDDTIFRVREVVKTHTTHISTFKALNSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVDIIYTHAGMT-PDLFQASLNSHAKGVVIAGVGNGNVSAGFLKAMQEASQMGVVIVRSSRVGSGGVT-SGEIDDKAYGFITSDNLNPQKARVLLQLALTKTNDKAKIQEMFEEY
3NXK Chain:A ((8-334))----KSRIAILGTGGTIAGFIDSTIATTGYAAGAIDIDVLIKAVPQIRDLADISWEQIANIDSSNMCDEIWLRLAKKIAKLF-AEGIDGVVITHGTDTMEETAYFLNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALVVNKEAKNKGVMVAINDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNVIKAHTKNAPFDVSKLT-SLPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIHKNQKDVLKELLKKGLKVVVSSRVVAGCVAVSD--SDEKLGFISAEDLNPQKARVLLMLALTKTSDPKKIQEYFLKY


General information:
TITO was launched using:
RESULT:

Template: 3NXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -213402 for 2878 contacts (-74.1/contact) +
2D Compatibility (PS) -35988 + (NN) -21496 + (LL) 676
1D Compatibility (HY) -28800 + (ID) 7350
Total energy: -306360.0 ( -106.45 by residue)
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_3NXK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NXK-query.scw
PDB file : Tito_Scwrl_3NXK.pdb: