Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQPVIKEGTLALIDTFAYLFRSYYMSAKNKPLTNDKGFPTGLLTGLVGMVKKFYKDRKNMPFIVFALESQTKTKRAEKLGEYKQNRKDAPKEMLLQIPIALEWLQKMGFTCVEVGGFEADDVIASLATLSPYKTRIYSKDKDFNQLLSDKIALFDGKTEFLAKDCVEKYGILPSQFTDYQGIVGDSSDNYKGVKGIGSKNAKELLQRLGSLEKIYENLDLAKNLLSPKMYQALIQDKGSAFLSKELATLERGCIKEFDFLSCAFPSENPLLKIKDELKEYGFISTLRDLENSPFIVENVPILNSTPILDNTPALDNAPKKSRMIVLESAEPLSMFLEKLENPNARVFMRLVLDKDKKILALAFLLQDQGYFLPLEEALFSPFSLEFLQNAFSQMLQHACIIGHDLKPLLSFLKAKYQVPLENIRIQDTQILAFLKNPEKVGFDEVLKEYLKEDLIPHEKIKDFKTKSKAEKSELLSMELNALKRLCEYFEKGGLEEDLLTLARDIETPFVKVLMGMEFQGFKIDAPYFKRLEQEFKNELNVLERQILDLIGVDFNLNSPKQLGEVLYDKLGLP---KNKS-HSTDEKNLLKILDKHPSIPLILEYRELNKLFNTYTTPLLRLKDKDDK-IHTTFIQTGTATGRLSSHSPNLQNIPVRSPKGLLIRKGFIASSKEYCLLGVDYSQIELRLLAHFSQDKDLMEAFLKGRDIHLETSKALFG---EDLAKEKRSIAKSINFGLVYGMGSKKLSETLSIPLSEAKSYIEAYFKRFPSIKDYLNGMREEILKTSKAFTLLGRYRVF-DFTGVNDYVKGNYLREGVNAIFQGSASDLLKLGMLKVSERFKNNP-SVRLLLQVHDELIFEIEEKNAPELQQEIQRILNDEVYPLRVPLETSAFIAKRWNELKG
1NJX Chain:A ((173-580))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQDRLLV--ELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAV-TLRVPLKVDYHYGSTWYDAK-


General information:
TITO was launched using:
RESULT:

Template: 1NJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170397 for 3140 contacts (-54.3/contact) +
2D Compatibility (PS) -42844 + (NN) -16917 + (LL) 35296
1D Compatibility (HY) -32000 + (ID) 8050
Total energy: -234912.0 ( -74.81 by residue)
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_1NJX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NJX-query.scw
PDB file : Tito_Scwrl_1NJX.pdb: