Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAEDGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAVRTKLPDIWISVDSWRAEVAEQAILAGADMINDQWGAKKEPKIAEVAAKYDVPICLMHNRENAQ------YDNFLEDVKKDLLESIAIAKAASVPDEHIILDPGFG---FVKTPAQNLEVLRRIDEIVALGYEVLLGTSRKSTIGLVLGTTPGDRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITNL
3TR9 Chain:A ((22-293))--RIVFS-EPAVMGIINVSPNSFYHPH--LDLNSALRTAEKMVDEGADILDIGGEATNPFV-SPSTQIELDRLLPVIDAIKKR-FPQLISVDTSRPRVMREAVNTGADMINDQRALQL-DDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLNQPPENRLFGSIAADVLAVYHGASIIRTHDVKATREAIKIATYTRSVD-----


General information:
TITO was launched using:
RESULT:

Template: 3TR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121967 for 2203 contacts (-55.4/contact) +
2D Compatibility (PS) -28430 + (NN) -19136 + (LL) 968
1D Compatibility (HY) -16000 + (ID) 4700
Total energy: -189265.0 ( -85.91 by residue)
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_3TR9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TR9-query.scw
PDB file : Tito_Scwrl_3TR9.pdb: